Devices, methods and systems for low volume microarray processing

a microarray and microarray technology, applied in the direction of positive displacement liquid engines, laboratory glassware, instruments, etc., can solve the problem that the surface does not provide an exposed analyte sample, and achieve the effect of reducing or preventing the degradation of analyte samples or reagents during processing, reducing or eliminating liquid retention interfaces

Inactive Publication Date: 2005-07-05
3M INNOVATIVE PROPERTIES CO
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

This patented technology allows small amounts of fluorescently labeled material can effectively spread throughout large areas like entire surfaces while maintain their stability. By utilizing this property, it becomes possible to measure very tiny samples accurately even when they have many different substances mixed together within them. Additionally, there're also eliminating problems related to handling liquids containing these materials due to potential contaminations. Overall, this technology improves upon existing methods for analyzing smaller volumes of biological samples.

Problems solved by technology

There has been developed various techniques related to improving the efficiency and accuracy of analyzing tiny amounts of material called DNA sequences. These include miniaturizing analysis tools like ion probes into smaller sizes while also reducing costs associated with manufacturing them. However, current solutions have limitations due to their complexities involving multiple steps involved when preparing large numbers of materials.

Method used

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  • Devices, methods and systems for low volume microarray processing
  • Devices, methods and systems for low volume microarray processing
  • Devices, methods and systems for low volume microarray processing

Examples

Experimental program
Comparison scheme
Effect test

example 1

Coated Heat Shrink Film with Undulated Surface

[0094]A sample of polyethylene heat shrink film coated with an azlactone / dimethylacrylamide copolymer was prepared according to International Publication No. WO 99 / 53319, providing a reactant surface having undulated wrinkles. A microarray device having dimensions of 1.8×2.5 cm was adhered to a glass microscope slide. The glass slide with microarray device was placed on a flat, level surface (0 degrees) and 100 microliters of DNA hybridization buffer (3× SSC, 0.3% SDS, 1 mg / ml Yeast tRNA and 1 mg / ml Poly A) was placed on the center of the microarray device. Radial spreading of the liquid was observed, propagating until it reached the outer edges of the microarray device. The sample was then tilted approximately 20 degrees from horizontal. The free liquid above the reactant surface was observed to migrate to the “low” side of the film, accumulating in a linear bead at the edge of the film without draining off. Rotating the microarray

example 2

Nylon Membrane with Porous Fiber Network

[0095]A section of nylon membrane (TAS Membrane, 0.45 micron pore size from BioRobotics, Inc., Cambridge UK) approximately 2×2.5 cm was adhered to a glass microscope slide using double sided adhesive tape to form a reactant surface.

[0096]The glass slide was placed on a flat, level surface (0 degrees) at which time 150 microliters of water containing green food coloring was pipetted onto the center of the membrane. Radial spreading of the solution over the membrane was observed. The sample was gently rotated as described in Example 1. The free liquid not adsorbed into the membrane was observed to accumulate at the edge of the membrane without flowing over the edge. The sample was then rotated to a vertical position, i.e., a 90 degree angle off of horizontal. The solution was retained on the membrane even at that extreme angle.

example 3

Polymeric Film with V-Channel Structures

[0097]A hydrophilic polypropylene film with a microreplicated structured surface of adjacent linear V-groove channels embossed in the surface was prepared according to U.S. Pat. No. 5,728,466. The embossed polymer surface included open V-grooves having an isosceles triangular cross section with a base angle (the bottom of the “V”) of approximately 135 degrees and a height of approximately 100 micrometers. A section of film approximately 2×2 cm was adhered to a glass microscope slide using double-sided adhesive tape.

[0098]The glass slide was then placed on a flat, level surface at which time 75 microliters of water containing green food coloring (to provide contrast) was pipetted onto the center of the film. The liquid was observed to spread along the V-groove channels until it reached the edge of the film. The sample was tilted approximately 20 degrees. The liquid was observed to migrate along the channels to the “low” side of the film, accumulat

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PUM

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Abstract

Devices, methods and systems for low volume microarray processing are disclosed. The microarray devices preferably include a plurality of reactant sites on a reactant surface. The reactant sites include reactants that operate to capture one or more selected analytes that can then be detected based on an electromagnetic signal, e.g., fluorescence, that is emitted by each analyte in response to excitation energy incident on the microarray device. Mixing and/or distribution of the analyte sample over the reactant surface is accomplished by tilting the reactant surface such that the analyte sample flows over the reactant surface under the force of gravity. The tilting is performed such that a portion of the analyte sample accumulates in a bead along a first edge of the reactant surface. The reactant surface is then tilted in a different direction such that a portion of the analyte sample flows over the reactant surface and accumulates at a second edge. The reactant surface preferably generates sufficient capillary forces with the analyte sample such that the analyte sample is retained on the reactant surface. The tilting and resultant flow may be performed as many times as necessary to obtain the desired mixing and/or distribution of analyte sample over the reactant surface.

Description

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Claims

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Application Information

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Owner 3M INNOVATIVE PROPERTIES CO
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