Method and system for discovering utilization of ceRNA mechanism by long non-coding RNA molecular markers through multi-data platform and application
A technology of long-chain non-coding and molecular markers, applied in bioinformatics, instrumentation, genomics, etc., can solve problems that cannot be completed independently
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[0105] Firstly, the original data of the data platform is processed, based on the results of LncRNA differential analysis, combined with the results of clinical characteristics analysis to screen suitable LncRNAs, miRNA predictions can be made based on their sequence characteristics and ceRNA mechanism characteristics, and the target genes of miRNAs can be further predicted, and finally Screen out target genes associated with disease. On the basis of the above analysis, a series of statistical and visual analysis are carried out.
[0106] 1. The list of LncRNA expression values is shown in Table 1
[0107] Analysis platform: R platform
[0108] Analysis software: limma
[0109]
[0110] 2. The list of LncRNA expression values is shown in Table 2
[0111] Analysis platform: R platform
[0112] Analysis software: limma
[0113]
[0114] 3. The list of differentially expressed LncRNA expression value files is shown in Table 3
[0115] Analysis platform: R platform
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