PCV2-PRV (porcine circovirus type 2-porcine pseudorabies virus) two-temperature type double PCR (polymerase chain reaction) detection primers and diagnosis method thereof

A diagnostic method, PCV2-F2 technology, applied in the biological field, can solve the problems of laborious, time-consuming, non-specific reaction and low sensitivity, and achieve the effect of low cost, simple operation and good specificity

Inactive Publication Date: 2019-09-27
HANGZHOU NORMAL UNIVERSITY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

This technology allows us to determine important factors such as temperatures used during amplification reactions or how many times they should be done before reaching certain levels that could affect their effectiveness on reducing viral load (the virus causing symptoms). It also provides high accuracy with minimal effort required compared to other methods like qPCR.

Problems solved by technology

Technologies described in this patents involve studying how different types of bacteria called PVCs or pseudooxylic acid hydrolase affect swines' health when infected with certain strains that may lead to disease outbreaks like Post Weakened Swine Syndromes (PMWS). Current diagnostic techniques require expensive equipment and long periods before accurate results could be obtained. Multiplex PCR technology provides an efficient way to detect both PMSV-2 and PRTV without requiring specialized facilities.

Method used

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  • PCV2-PRV (porcine circovirus type 2-porcine pseudorabies virus) two-temperature type double PCR (polymerase chain reaction) detection primers and diagnosis method thereof
  • PCV2-PRV (porcine circovirus type 2-porcine pseudorabies virus) two-temperature type double PCR (polymerase chain reaction) detection primers and diagnosis method thereof

Examples

Experimental program
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Effect test

Embodiment 1

[0030] PCV2-PRV two-temperature double PCR detection primers, including PCV2 virus primer pair and PRV virus primer pair;

[0031] Wherein, the PCV2 virus primer pair includes upstream primer PCV2-F1 and downstream primer PCV2-F2; the PRV virus primer pair includes upstream primer PRV-F3 and downstream primer PRV-F4;

[0032] The sequence of the upstream primer PCV2-F1 is: 5'-AGTCTCATCCACAGCTGATTC-3';

[0033] The sequence of the downstream primer PCV2-F2 is: 5'-CATCTTGGCCAGATCCTCCG-3';

[0034] The sequence of the upstream primer PRV-F3 is: 5'-TCCTGTACGCCCTATTCA-3';

[0035] The sequence of the downstream primer PRV-F4 is: 5'-CCGACTCTCGTGATGTCATCC-3'.

Embodiment 2

[0037] The PCV2-PRV two-temperature double PCR diagnostic method comprises the following steps:

[0038] 1) Synthesize PCV2 virus primers to PCV2-F1 / PCV2-F2 and PRV virus primers to PRV-F3 / PRV-F4;

[0039] 2) Extracting viral genomic DNA from PCV2 and PRV disease materials;

[0040] 3) PCV2 DNA and PRV DNA were amplified and detected by two-temperature PCR.

[0041] Further, the method for extracting the viral genomic DNA in step 2) is as follows: take 0.1 g of PCV2 and PRV positive disease materials respectively, place them in an Eppendorf tube, add 1 ml of TE buffer solution, and twist it into a homogenate with a twister, - Freeze and thaw three times at 70°C, centrifuge to get 0.2ml of the supernatant, then use a viral DNA extraction kit to extract viral DNA, and finally elute in 50ul TE buffer and store at -20°C to obtain PCV2DNA and PRV DNA.

[0042] Further, the method of the two-temperature type PCR amplification in step 3) is:

[0043] Use PCV2 and PRV DNA as templ

Embodiment 3

[0053] The method for determining the optimal annealing temperature for two-temperature PCR is: mix the 50 μl reaction system in Example 2 and put it in a PCR amplification instrument. The amplification conditions are: 95°C for 5 minutes; ℃, 46.9°C, 49.0°C, 51.4°C, 53.7°C, 56.3°C, 58.6°C, 61.0°C, 63.1°C, 64.4°C for 45s, 35 cycles; the final extension at 72°C for 10 min, after agarose gel electrophoresis, as figure 1 As shown, the results show that the optimal annealing temperature of PRV is 61°C, at which point the two specific bands can be clearly distinguished, and the product amplification efficiency is the highest.

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Abstract

The invention provides PCV2-PRV (porcine circovirus type 2-porcine pseudorabies virus) two-temperature type double PCR (polymerase chain reaction) detection primers and a diagnosis method thereof. The primers comprise a PCV2 primer pair and a PRV primer pair, wherein the PCV2 primer pair comprises an upstream primer PCV2-F1 and a downstream primer PCV2-F2; the PRV primer pair comprises an upstream primer PRV-F3 and a downstream primer PRV-F4. Key parameters of the two-temperature type PCR are explored, so that PCV2 and PRV can be detected synchronously, and the primers are simple to operate, low in technological requirement, low in cost, time-saving and labor-saving, have good specificity, sensitivity and stability and are suitable for clinical popularization and application.

Description

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Claims

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Application Information

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Owner HANGZHOU NORMAL UNIVERSITY
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