The invention relates to a polymer composite material filled with industrial lignin as well as a preparation method and an application thereof. The polymer composite material is characterized in that substances forming the polymer composite material comprise rubber A, lignin and a third constituent, wherein the ratio of the oven dry parts by weight of the substances in the polymer composite material is 100:(10-300):(0-100); the rubber A is natural rubber or synthetic rubber produced by an emulsion polymerization method; the lignin is hydroxymethylation modified lignin produced from alkali lignin or black liquor; in a technical scheme in which the oven dry part by weight of the third constituent is greater than 0, the third constituent is one or the combination of more than two of other rubbers or plastics except the rubber A, or a plasticizer or operating oil, or argil, montmorillonoid, kaolin, kieselguhr or calcium carbonate, or papermaking pulp taking calcium carbonate as a main ingredient, or alkali-preparing waste, namely, white clay; the polymer composite material filled with the industrial lignin is of a block form or a powder form. According to the polymer composite material filled with the industrial lignin as well as the preparation method and the application thereof disclosed by the invention, the manufacturing cost is further decreased, and wastewater generated during the production process is further reduced.