Identification and application of sugarcane SPSB gene isotype 2

An isotype, gene technology, applied in the application, genetic engineering, plant genetic improvement and other directions, can solve the problem of molecular assisted breeding yet to be developed and so on

Pending Publication Date: 2021-01-12
SUGARCANE RES INST OF YUNNAN ACADEMY OF AGRI SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

At present, my country's sugarcane breeding is basically based on traditio

Method used

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  • Identification and application of sugarcane SPSB gene isotype 2
  • Identification and application of sugarcane SPSB gene isotype 2
  • Identification and application of sugarcane SPSB gene isotype 2

Examples

Experimental program
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Embodiment 1

[0041] Cloning and sequencing analysis of the cDNA sequence of sugarcane SPSB gene of embodiment 1

[0042] 1. Sample RNA extraction and cDNA synthesis

[0043]In the present invention, sugarcane YZ14-401 leaves at the mature stage are used as detection objects, and the total RNA is extracted with the EasyPurePlant RNA Kit provided by Quanshijin Company, and finally dissolved in sterilized ultrapure water, and stored at 4°C after detection. The OD value of the RNA sample at 260nm and 280nm was measured with a UV photometer. Calculate the RNA content and the ratio of OD260 / OD280 to evaluate the quality of RNA extraction; after the RNA detection is completed, take out a certain amount and dilute it to 10ng / μL for the synthesis template of cDNA. First-Strand cDNA Synthesis SuperMix kit was used to synthesize cDNA.

[0044] 2. Primer design

[0045] The published SPSB gene sequence was obtained from NCBI, and the GenBank ID was JN584485. Primer5.0 software was used to design

Embodiment 2

[0055] Cloning and sequencing analysis of the cDNA sequence of the sugarcane SPSB gene of embodiment 2

[0056] 1. Sample RNA extraction and cDNA synthesis

[0057] In the present invention, sugarcane YZ14-401 leaves at the mature stage are used as detection objects, and the total RNA is extracted with the EasyPurePlant RNA Kit provided by Quanshijin Company, and finally dissolved in sterilized ultrapure water, and stored at 4°C after detection. The OD value of the RNA sample at 260nm and 280nm was measured with a UV photometer. Calculate the RNA content and the ratio of OD260 / OD280 to evaluate the quality of RNA extraction; after the RNA detection is completed, take out a certain amount and dilute it to 10ng / μL for the synthesis template of cDNA. First-Strand cDNA Synthesis SuperMix kit was used to synthesize cDNA.

[0058] 2. Primer design

[0059] The published SPSB gene sequence was obtained from NCBI, and the GenBank ID was JN584485. Primer5.0 software was used to de

Embodiment 3

[0066] Example 3 Cloning and sequencing analysis of sugarcane SPSB gene cDNA sequence

[0067] 1. Sample RNA extraction and cDNA synthesis

[0068] In the present invention, sugarcane YZ14-401 leaves at the mature stage are used as detection objects, and the total RNA is extracted with the EasyPurePlant RNA Kit provided by Quanshijin Company, and finally dissolved in sterilized ultrapure water, and stored at 4°C after detection. The OD value of the RNA sample at 260nm and 280nm was measured with a UV photometer. Calculate the RNA content and the ratio of OD260 / OD280 to evaluate the quality of RNA extraction; after the RNA detection is completed, take out a certain amount and dilute it to 10ng / μL for the synthesis template of cDNA. First-Strand cDNA Synthesis SuperMix kit was used to synthesize cDNA.

[0069] 2. Primer design

[0070] The published SPSB gene sequence was obtained from NCBI, and the GenBank ID was JN584485. Primer5.0 software was used to design primers in t

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Abstract

The invention relates to identification and application of sugarcane SPSB gene isotype 2, and belongs to the technical field of plant molecular breeding. A cDNA sequence of high-sugar sugarcane YZ14-401 is used as a template, SPSB2351 is used as a primer for PCR amplification, a haplotype of an SPSB gene is screened through sequencing, a fifth intron part retention sequence exists between a fifthexon and a sixth exon, and sequences at two ends of the primer are completely the same as a CDS sequence of the SPSB gene. The SPSB gene isotype 2 can be used for designing a specific primer in a fifth intron retention section, identifying the expression of the isotype 2 and carrying out molecular marker-assisted selection. The sequence required for identifying the gene expression level of the SPSB gene isotype 2 is provided for sugarcane sugar trait marker-assisted breeding; tracking, identification and expression abundance detection of different haplotypes or isotypes of the SPSB gene in sugarcane filial generations are facilitated; and the application has important significance in rapid establishment of sugarcane germplasm with excellent heredity.

Description

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Claims

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Application Information

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Owner SUGARCANE RES INST OF YUNNAN ACADEMY OF AGRI SCI
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