PARP protein degradation agent as well as preparation method and application thereof

A protein degradation and protein technology, applied in organic chemistry, drug combination, antineoplastic drugs, etc., can solve the problems of limiting therapeutic effect and incomplete degradation of PARP1 protein

Active Publication Date: 2021-03-09
FUJIAN MEDICAL UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, these compounds cannot completely degrade the intracellular PARP1 protein, limiting their therapeutic efficacy

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0034] The preparation of the compound shown in embodiment 1 formula 1-1

[0035]

[0036] Formula 1-1

[0037] A mixture of Nutlin acid intermediate (123.31 mg, 0.25 mmol), HATU (70 mg, 0.184 mmol) and DIEA (90 μL) was stirred in a round bottom flask in dry DMF (3.78 mL) at room temperature for 0.5 h. Then, a solution of niraparib (79 mg, 0.25 mmol) in 0.5 mL of anhydrous DMF was slowly added. The reaction mixture was stirred at room temperature for 12 hours. The water and the mixture were washed once with saturated aqueous NaCl by quenching the reaction, and the ethyl acetate was extracted with diethyl ether. The organic layer was washed with anhydrous Na 2 SO4 was dried and evaporated in vacuo to get crude product which was further purified by silica gel column chromatography (DCM:MeOH=40:1) to give the product.

[0038] 1 H NMR (400MHz, Chloroform-d) δ9.18–8.96 (m, 1H), 8.54 (d, J=5.4Hz, 1H), 8.32 (dd, J=6.7, 3.6Hz, 1H), 7.99–7.75 ( m,3H),7.61(dd,J=8.4,3.4Hz,1H),7...

Embodiment 2

[0039] The preparation of the compound shown in embodiment 2 formula 1-2

[0040]

[0041] Formula 1-2

[0042] A mixture of Nutlin acid intermediate (123.31 mg, 0.25 mmol), HATU (70 mg, 0.184 mmol) and DIEA (90 μL) was stirred in a round bottom flask in dry DMF (3.78 mL) at room temperature for 0.5 h. Then, add NH 2 -PEG 1 -COOtBu (33.26 mg, 0.25 mmol) in 0.5 mL of dry DMF. The reaction mixture was stirred at room temperature for 12 hours. The water and the mixture were washed once with saturated aqueous NaCl by quenching the reaction, and the ethyl acetate was extracted with diethyl ether. The organic layer was washed with anhydrous Na 2SO4 was dried and evaporated in vacuo to get crude product which was further purified by silica gel column chromatography (DCM:MeOH=40:1) to give the product.

[0043] To a solution of Nutlin derivative ester (140 mg, 0.020 mmol) in DCM (1 mL) was added TFA (2 mL) at 0°C. After stirring at room temperature for 17 hours, the resultin...

Embodiment 3

[0046] Example 3 The compound represented by formula 1-3 was prepared according to the above preparation method.

[0047]

[0048] Formula 1-3

[0049] 1 H NMR (400MHz, Chloroform-d) δ9.07(s, 1H), 8.56(s, 1H), 8.33(d, J=7.1Hz, 1H), 8.04(s, 1H), 7.88(dq, J= 25.5,9.0,8.1Hz,3H),7.61(d,J=8.5Hz,1H),7.41(dd,J=19.7,8.8Hz,2H),7.15–6.78(m,8H),6.56(d,J =8.0Hz,1H),6.49(s,1H),6.07(s,1H),5.59(d,J=9.5Hz,1H),5.49(d,J=9.4Hz,1H),4.85–4.67(m ,1H),4.66–4.53(m,1H),4.13(d,J=7.5Hz,1H),3.99(q,J=14.5,12.8Hz,2H),3.86(d,J=8.0Hz,6H) ,3.74(d,J=14.1Hz,1H),3.64(dd,J=12.2,5.1Hz,4H),3.58–3.38(m,5H),3.30(s,1H),3.13(d,J=10.6 Hz, 3H), 2.98(s, 1H), 2.91(s, 1H), 2.67(dd, J=21.5, 9.3Hz, 4H), 2.25–1.99(m, 2H), 1.37(d, J=16.6Hz ,6H).[M+H]1100.

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Abstract

A PARP protein degradation agent as shown in X-Y-Z or X-Z, and a preparation method and application thereof are provided; X-Y-Z (I-1) or X-Z (I-2) is as shown in the specification, X represents a ligand of PARP protein, Z represents a ligand of E3 ligase, Y represents a chain connecting X and Z, and the compound can target and degrade PARP protein and can be further used for treating or preventingtumors.

Description

technical field [0001] The invention relates to the field of preparation of anti-tumor drugs, in particular to a compound targeting to degrade PARP protein and its preparation method and application. Background technique [0002] Polyadenosine diphosphate-ribose polymerase [poly(ADP-ribose) polymerase, PARP] is a ribozyme closely related to DNA repair, especially BER repair of DNA single-strand damage, including 18 subtypes, of which PARP-1 Highest content in eukaryotic cells. When tumor cell DNA is damaged by chemotherapy drugs or ionizing radiation, PARP-1 is quickly activated, and uses NAD+ as a substrate to transfer polyadenosine diphosphate-ribose (ADP) to specific proteins, and PARP-1 catalyzes specific Protein polyadenosine diphosphate ribosylation (PARylation), which initiates the DNA repair process. Studies have shown that PARP-1 is involved in DNA repair pathways such as BER, HR and NHEJ. [0003] PARP inhibitors can prevent damaged DNA from being effectively re...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C07D401/14A61P35/00
CPCC07D401/14A61P35/00
Inventor 刘洋林珊珊吴丽贤黄秀旺许建华刘全裕林友文
Owner FUJIAN MEDICAL UNIV
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